Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900353.1_cds_XP_016450419.1_44874
CDS Infomation

[gene=LOC107775222] [db_xref=GeneID:107775222] [protein=protein LHY-like] [protein_id=XP_016450419.1] [location=join(25179..25217,25503..25614,26119..26180,43068..43295,43374..44822,44905..45318)] [gbkey=CDS]
Sequence

ATGGACCCTTATTCCTCTGGAGAGGAACTTGTTGTTAAGACAAGGAAACCTTATACCATC
ACTAAGCAACGAGAGCGATGGACAGAGGAGGAACACAATAGGTTCCTAGAAGCCTTGAAA
CTCTATGGGCGTGCTTGGCAGCGCATAGAAGAACACATAGGAACAAAAACTGCCGTGCAG
ATCAGAAGTCATGCGCAAAAATTCTTTACAAAGTTAGAAAAGGAGGCTGTTATAAAGGGA
GTCCCAATAAGTCAAGCACTCGACATTGAAATTCCTCCACCACGACCTAAAAGGAAACCA
AGTAATCCTTATCCTCGTAAGACCAGCGTAGCAGTTCCCTCATCACAGGTGGGAATAAAG
GATGGAAAATTATCAACACCTTTTTCTTCCATCTGTGAGGATAGGAACTTATTTGACCTG
GAGAAAGAACCGATTGCTGAGAAACCTGGTAGAAACGAGAAGCTGGGCAGTGTACAAGAA
GACCAGAACAAGAAAAATTGCTCCCAAGGGTTCACTCTTTTCAAGGAAGGTGCTTCTGCG
CCCTCTCTGTCCCTAGGGAAGTCTTTGCAGACACTTGCAGAACCTGCAGGATCATGCACT
TTAAATGAGTCTGTGCCTGTCACTCAAGGAGTGATTAACCATGATGTAACAGCTAAATCT
TTTCTTACTGTTGAATCCAAAGAGCATCAAAAGTTGGATATACTCGACGCTAAACAGTCC
TTTCAAAGTAACAGCTCTTGTAACACCTTCAACGGGGGGAAATCTTGTCAATCGAATGAG
AAGTTGGTACAAGATGAGAAAAAAGATCAACCGAGTCAGCCAGATCATTTTGGGGAATTC
TCAAGAAATGATATGCAAGTGCCACACAACTATCCAAGACATGTCCCAGTGCATATTCTT
GATGGGGCCTTAGGGGTGAATGGTGCTCAAACAACCCCAGATATGTTTTATCCTGAATCC
GTAAGTCACCAGATAGGTGGCGTCCAGGGACTCTCAAATTTGTATGCCAACCCTACTTCA
TCTGCCACATCTGAGCACCATAGTAATGCTGCAATGTCTTCCATTCATCAGTCATTTCCT
TGTTTCCACCCTAACTTCACCCCTATTCGTGATCCAGATGATTACCGATCGTTTCTTCAA
CTCTCCTCCACTTTCTCCAGCCTTATATTTTCTGCGTTATTGCAAAACCCAGCCGCACAT
GCTGCAGCAAGTTTTGCAGCTAGCTTTTGGCCTTATGCAAATGTGGAAGCTCCAGTAGAT
TGTCCAACAGGTAACACTTCAAGCCAGATTAATTCAGCTCCTAGTATGGCAGCAATTGCT
GCTGCCACTGTAGCAGCTGCAACTGCATGGTGGGCAGCCCATGGGCTCCTACCATTGTGT
TCGCCATTTCATAGCAGTTCTACCTGTGTTCCTACATCTGCAACATCAATGCAAGTGGAT
CCTTGTCAACCTAGTGTAGAGAAGAATGAAGGAAGAGAGGGATCTCATAATTCTCCCCAT
GCTCAACAAGCCGTCCCGGATTGCTCTGAAGCTTTGCAAGAACAACATTCTGCTTCTGAG
TTGCCAACTTCGCCATCATCAGAATCGGAGGAGAGTGAAGGTAGGAAGCTAAAAACTGGG
TTAACCGCTGATAATACTGAGCAAGGAGCTGCAGTCACTGAAATTCATGAGCCAAACACA
GGAAAGGGAAGAAAACAGGTAGACCGTTCTTCCTGTGGTTCCAATACACCTTCAAGTAGT
GATTTGGAGACAGATGCTTTGGAGAAGGATCAGAAAGGTAAAGAAGAGCCTCAAGAACCT
AATGTTAACCTTCTAGCTGGAGATGCTGGGAATCGGCGTGGTAGGAATTGCATCAGTCCA
AATGATTCTTGGAAAGAAGTCTCCGAAGGGGGACGGATAGCATTCCAGGCTCTTTTCACC
AGAGAGAAGTTGCCTCAAAGCTTTTCTCCTTCAAATGATCCGAAAAATAAGGGAAAAATC
AATCTTGAAAAGATTAAGCAAATGCCAGATGAGAAAGGTCTAAGTGGATCGCAGTTAGAC
CTTAATGATCAGGCATCCGATATCTGTTCCAGTCATCAAGCAGTGGAAGATAATGTGTTA
GTAATTGGCAACAAAGAAGATGCTGAAAAATGCCTACCAATGATGGAACTTGGACAAGTA
AGGTTGAAAGCTCATCGTACTGGATTTAAACCTTACAAGAGGTGCTCATTGGAGGCCAAA
GATGGCAGGGTGGCAAGTTCAAGCTGTCAGGACGAGGAAAAAAGCGCCAAGAGACTTCGC
TTGGAAGGAGAAGCTTCTATTTGA

Peptide Sequence

PEP ID

XP_016450419.1
PEP Infomation

PREDICTED: protein LHY-like [Nicotiana tabacum]
Sequence

MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAVIKGVPISQALDIEIPPPRPKRKPSNPYPRKTSVAVPSSQVGIK
DGKLSTPFSSICEDRNLFDLEKEPIAEKPGRNEKLGSVQEDQNKKNCSQGFTLFKEGASA
PSLSLGKSLQTLAEPAGSCTLNESVPVTQGVINHDVTAKSFLTVESKEHQKLDILDAKQS
FQSNSSCNTFNGGKSCQSNEKLVQDEKKDQPSQPDHFGEFSRNDMQVPHNYPRHVPVHIL
DGALGVNGAQTTPDMFYPESVSHQIGGVQGLSNLYANPTSSATSEHHSNAAMSSIHQSFP
CFHPNFTPIRDPDDYRSFLQLSSTFSSLIFSALLQNPAAHAAASFAASFWPYANVEAPVD
CPTGNTSSQINSAPSMAAIAAATVAAATAWWAAHGLLPLCSPFHSSSTCVPTSATSMQVD
PCQPSVEKNEGREGSHNSPHAQQAVPDCSEALQEQHSASELPTSPSSESEESEGRKLKTG
LTADNTEQGAAVTEIHEPNTGKGRKQVDRSSCGSNTPSSSDLETDALEKDQKGKEEPQEP
NVNLLAGDAGNRRGRNCISPNDSWKEVSEGGRIAFQALFTREKLPQSFSPSNDPKNKGKI
NLEKIKQMPDEKGLSGSQLDLNDQASDICSSHQAVEDNVLVIGNKEDAEKCLPMMELGQV
RLKAHRTGFKPYKRCSLEAKDGRVASSSCQDEEKSAKRLRLEGEASI

Transcript Sequence

Gene sequence data has not been registered.